A software specially designed for DHS identification. Github Introduction DNase I hypersensitive sites (DHSs) are regions of chromatin that are sensitive to cleavage by the...
Oligo datasets which host oligo sequences for Oligo-FISH. Details Introduction The oligo datasets currently host oligo sequences of nine species, including Arabidopsis, rice, maize, potato, barley, soybean, human, mouse and...
CAPE: An efficient CRISPR-Cas12a promoter editing system for crop improvement [JBrowse preview](https://bioinfor.yzu.edu.cn/jbrowse2/cape) ## Introduction we demonstrate a **CAPE** based promoter editing and tuning pipeline for efficient production of useful quantitative...
CAPE: An efficient CRISPR-Cas12a promoter editing system for crop improvement JBrowse preview Introduction we demonstrate a CAPE based promoter editing and tuning pipeline for efficient production of useful quantitative trait...
Abstract: In the evolutionary history of plants, variation in cis-regulatory elements (CREs) resulting in diversification of gene expression has played a central role in driving the evolution of lineage-specific traits....
Abstract: Grains from cereals contribute an important source of protein to human food, and grain protein content (GPC) is an important determinant of nutritional quality in cereals. Here we show...
Abstract: Nearly 50% of mouse and human genomes are composed of repetitive sequences. Transcription of these sequences is tightly controlled during development to prevent genomic instability, inappropriate gene activation and...
Abstract: Glycogen synthase kinase 3 (GSK3) family members serve as signaling hubs for plant development and stress responses, yet the underlying mechanism of their transcriptional regulation remains a long-standing mystery....