Plant DNA LLMs
Introduction
PDLLMs is a website designed for performing downstream prediction tasks based on DNA large language models in plants. The website supports multiple genomic tasks, including predictions of core promoter, sequence conservation, histone modifications, lncRNAs, open chromatin and promoter strength. In addition, it supports multiple models and tokenizers for inference, allowing users to choose the appropriate combination based on their needs or according to the website’s recommendations to perform tasks.
Web applications for prediction:
For finetuning or inference using our models, please see:
For using our models and plant genomic datasets, please see:
Video tutorial for using our models
TODO.
Contact
QQ group: 756369317
Preview
Citation
- Liu GQ, Chen L, Wu YC, Han YS, Bao Y, Zhang T*. PDLLMs: A group of tailored DNA large language models for analyzing plant genomes. Molecular Plant DOI: https://doi.org/10.1016/j.molp.2024.12.0066